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Breunis, W; Brack, E; Ehlers, AC; Bechtold, I; Kisele, S; Wurth, J; Mous, L; Zabele, D; Steffen, F; Zahnow, F; Britschgi, C; Bankel, L; Rothermundt, C; Vetter, C; Müller, D; Botter, S; Pauli, C; Bode, P; Rinner, B; Bourquin, JP; Roessler, J; Grünewald, TGP; Schäfer, BW; Surdez, D; Wachtel, M.
Patient-derived tumoroids from CIC::DUX4 rearranged sarcoma identify MCL1 as a therapeutic target.
Nat Commun. 2025; 16(1):7688
Doi: 10.1038/s41467-025-62629-6
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PubMed
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- Autor*innen der Med Uni Graz:
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Rinner Beate
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- Abstract:
- High-risk sarcomas, such as metastatic and relapsed Ewing and CIC-rearranged sarcoma, still have a poor prognosis despite intensive therapeutic regimens. Precision medicine approaches offer hope, and ex vivo drug response profiling of patient-derived tumor cells emerges as a promising tool to identify effective therapies for individual patients. Here, we establish ex vivo culture conditions to propagate Ewing sarcoma and CIC::DUX4 sarcoma as tumoroids. These models retain their original molecular and functional characteristics, including recurrent ARID1A mutations in CIC::DUX4 sarcoma, and serve as tumor avatars for large-scale drug testing. Screening a large drug library on a small living biobank of such tumors not only reveals distinct differences in drug response between the two entities, but also identifies a dependency of CIC::DUX4 sarcoma cells on MCL1. Mechanistically, MCL1 is identified as a direct transcriptional target of the CIC::DUX4 fusion oncogene. Genetic and pharmacological inhibition of MCL1 induces rapid apoptosis in CIC::DUX4 sarcoma cells and inhibits tumor growth in a xenograft model. Thus, MCL1 represents a potential therapeutic target for CIC::DUX4 sarcoma. Overall, our study highlights the feasibility of drug response profiling for individual sarcoma cases and suggests that further clinical assessments of its benefit are warranted.
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