Medizinische Universität Graz Austria/Österreich - Forschungsportal - Medical University of Graz

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Publikationen

Suchbegriffe: HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING - , . Treffer: 33

2019

Washetine, K; Heeke, S; Ribeyre, C; Bourreau, C; Normand, C; Blons, H; Laurent-Puig, P; Mulot, C; Clermont, D; David, M; Clément, B; Dagher, G; Hofman, P DNAshell Protects DNA Stored at Room Temperature for Downstream Next-Generation Sequencing Studies.
Biopreserv Biobank. 2019; 17(4): 352-354. Doi: 10.1089/bio.2018.0129
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2018

Kashofer, K; Gornicec, M; Lind, K; Caraffini, V; Schauer, S; Beham-Schmid, C; Wölfler, A; Hoefler, G; Sill, H; Zebisch, A Detection of prognostically relevant mutations and translocations in myeloid sarcoma by next generation sequencing.
Leuk Lymphoma. 2018; 59(2):501-504 Doi: 10.1080/10428194.2017.1339879 [OPEN ACCESS]
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2017

Chen, S; El-Heliebi, A; Tauber, G; Langsenlehner, T; Pötscher, M; Kashofer, K; Czyż, ZT; Polzer, B; Riethdorf, S; Kuske, A; Leitinger, G; Pantel, K; Kroneis, T; Sedlmayr, P Catch and Release: rare cell analysis from a functionalised medical wire.
Sci Rep. 2017; 7(2):43424-43424 Doi: 10.1038/srep43424 [OPEN ACCESS]
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Hoefler, G Next-Generation Sequencing in Diagnostics and Clinical Research.
Pathobiology. 2017; 84(6):289-291 Doi: 10.1159/000485366 [OPEN ACCESS]
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Lohberger, B; Stuendl, N; Leithner, A; Rinner, B; Sauer, S; Kashofer, K; Liegl-Atzwanger, B Establishment of a novel cellular model for myxofibrosarcoma heterogeneity.
Sci Rep. 2017; 7(9):44700-44700 Doi: 10.1038/srep44700 [OPEN ACCESS]
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Moissl-Eichinger, C; Probst, AJ; Birarda, G; Auerbach, A; Koskinen, K; Wolf, P; Holman, HN Human age and skin physiology shape diversity and abundance of Archaea on skin.
Sci Rep. 2017; 7(1):4039-4039 Doi: 10.1038/s41598-017-04197-4 [OPEN ACCESS]
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Möller, I; Murali, R; Müller, H; Wiesner, T; Jackett, LA; Scholz, SL; Cosgarea, I; van de Nes, JA; Sucker, A; Hillen, U; Schilling, B; Paschen, A; Kutzner, H; Rütten, A; Böckers, M; Scolyer, RA; Schadendorf, D; Griewank, KG Activating cysteinyl leukotriene receptor 2 (CYSLTR2) mutations in blue nevi.
Mod Pathol. 2017; 30(3):350-356 Doi: 10.1038/modpathol.2016.201 [OPEN ACCESS]
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Pichler, M; Stiegelbauer, V; Vychytilova-Faltejskova, P; Ivan, C; Ling, H; Winter, E; Zhang, X; Goblirsch, M; Wulf-Goldenberg, A; Ohtsuka, M; Haybaeck, J; Svoboda, M; Okugawa, Y; Gerger, A; Hoefler, G; Goel, A; Slaby, O; Calin, GA Genome-Wide miRNA Analysis Identifies miR-188-3p as a Novel Prognostic Marker and Molecular Factor Involved in Colorectal Carcinogenesis.
Clin Cancer Res. 2017; 23(5):1323-1333 Doi: 10.1158/1078-0432.CCR-16-0497 [OPEN ACCESS]
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Stelzl, E; Haas, B; Bauer, B; Zhang, S; Fiss, EH; Hillman, G; Hamilton, AT; Mehta, R; Heil, ML; Marins, EG; Santner, BI; Kessler, HH First identification of a recombinant form of hepatitis C virus in Austrian patients by full-genome next generation sequencing.
PLoS One. 2017; 12(7):e0181273-e0181273 Doi: 10.1371/journal.pone.0181273 [OPEN ACCESS]
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Zadora, J; Singh, M; Herse, F; Przybyl, L; Haase, N; Golic, M; Yung, HW; Huppertz, B; Cartwright, JE; Whitley, G; Johnsen, GM; Levi, G; Isbruch, A; Schulz, H; Luft, FC; Müller, DN; Staff, AC; Hurst, LD; Dechend, R; Izsvák, Z Disturbed Placental Imprinting in Preeclampsia Leads to Altered Expression of DLX5, a Human-Specific Early Trophoblast Marker.
CIRCULATION. 2017; 136(19): 1824-1839. Doi: 10.1161/CIRCULATIONAHA.117.028110 [OPEN ACCESS]
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2016

Grammatikopoulos, T; Sambrotta, M; Strautnieks, S; Foskett, P; Knisely, AS; Wagner, B; Deheragoda, M; Starling, C; Mieli-Vergani, G; Smith, J; University of Washington Center for Mendelian Genomics; Bull, L; Thompson, RJ Mutations in DCDC2 (doublecortin domain containing protein 2) in neonatal sclerosing cholangitis.
J Hepatol. 2016; 65(6):1179-1187 Doi: 10.1016/j.jhep.2016.07.017 [OPEN ACCESS]
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Jahn, SW; Kashofer, K; Thüringer, A; Abete, L; Winter, E; Eidenhammer, S; Viertler, C; Tavassoli, F; Moinfar, F Mutation Profiling of Usual Ductal Hyperplasia of the Breast Reveals Activating Mutations Predominantly at Different Levels of the PI3K/AKT/mTOR Pathway.
Am J Pathol. 2016; 186(1):15-23 Doi: 10.1016/j.ajpath.2015.09.004 [OPEN ACCESS]
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Krause, R; Halwachs, B; Thallinger, GG; Klymiuk, I; Gorkiewicz, G; Hoenigl, M; Prattes, J; Valentin, T; Heidrich, K; Buzina, W; Salzer, HJ; Rabensteiner, J; Prüller, F; Raggam, RB; Meinitzer, A; Moissl-Eichinger, C; Högenauer, C; Quehenberger, F; Kashofer, K; Zollner-Schwetz, I Characterisation of Candida within the Mycobiome/Microbiome of the Lower Respiratory Tract of ICU Patients.
PLoS One. 2016; 11(5):e0155033-e0155033 Doi: 10.1371/journal.pone.0155033 [OPEN ACCESS]
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Mora, M; Perras, A; Alekhova, TA; Wink, L; Krause, R; Aleksandrova, A; Novozhilova, T; Moissl-Eichinger, C Resilient microorganisms in dust samples of the International Space Station-survival of the adaptation specialists.
Microbiome. 2016; 4(1):65-65 Doi: 10.1186/s40168-016-0217-7 [OPEN ACCESS]
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Preuner, S; Barna, A; Frommlet, F; Czurda, S; Konstantin, B; Alikian, M; Machova Polakova, K; Sacha, T; Richter, J; Lion, T; Gabriel, C Quantitative Analysis of Mutant Subclones in Chronic Myeloid Leukemia: Comparison of Different Methodological Approaches.
Int J Mol Sci. 2016; 17(5): Doi: 10.3390/ijms17050642 [OPEN ACCESS]
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Rausch, S; Hennenlotter, J; Scharpf, M; Teepe, K; Kühs, U; Aufderklamm, S; Bier, S; Mischinger, J; Gakis, G; Stenzl, A; Schwentner, C; Todenhöfer, T Prostate tumor overexpressed 1 expression in invasive urothelial carcinoma.
J Cancer Res Clin Oncol. 2016; 142(5):937-947 Doi: 10.1007/s00432-015-2107-y
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Vieyra-Garcia, PA; Wei, T; Naym, DG; Fredholm, S; Fink-Puches, R; Cerroni, L; Odum, N; O'Malley, JT; Gniadecki, R; Wolf, P STAT3/5-Dependent IL9 Overexpression Contributes to Neoplastic Cell Survival in Mycosis Fungoides.
Clin Cancer Res. 2016; 22(13):3328-3339 Doi: 10.1158/1078-0432.CCR-15-1784 [OPEN ACCESS]
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2015

Aoude, LG; Heitzer, E; Johansson, P; Gartside, M; Wadt, K; Pritchard, AL; Palmer, JM; Symmons, J; Gerdes, AM; Montgomery, GW; Martin, NG; Tomlinson, I; Kearsey, S; Hayward, NK POLE mutations in families predisposed to cutaneous melanoma.
Fam Cancer. 2015; 14(4):621-628 Doi: 10.1007/s10689-015-9826-8
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Eisenberger, T; Decker, C; Hiersche, M; Hamann, RC; Decker, E; Neuber, S; Frank, V; Bolz, HJ; Fehrenbach, H; Pape, L; Toenshoff, B; Mache, C; Latta, K; Bergmann, C An efficient and comprehensive strategy for genetic diagnostics of polycystic kidney disease.
PLoS One. 2015; 10(2):e0116680-e0116680 Doi: 10.1371/journal.pone.0116680 [OPEN ACCESS]
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Jahn, SW; Kashofer, K; Halbwedl, I; Winter, G; El-Shabrawi-Caelen, L; Mentzel, T; Hoefler, G; Liegl-Atzwanger, B Mutational dichotomy in desmoplastic malignant melanoma corroborated by multigene panel analysis.
Mod Pathol. 2015; 28(7):895-903 Doi: 10.1038/modpathol.2015.39 [OPEN ACCESS]
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Kolanczyk, M; Krawitz, P; Hecht, J; Hupalowska, A; Miaczynska, M; Marschner, K; Schlack, C; Emmerich, D; Kobus, K; Kornak, U; Robinson, PN; Plecko, B; Grangl, G; Uhrig, S; Mundlos, S; Horn, D Missense variant in CCDC22 causes X-linked recessive intellectual disability with features of Ritscher-Schinzel/3C syndrome.
Eur J Hum Genet. 2015; 23(5):633-638 Doi: 10.1038/ejhg.2014.109 (- Case Report) [OPEN ACCESS]
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Leitner, E; Kessler, HH Broad-range PCR for the identification of bacterial and fungal pathogens from blood: a sequencing approach.
Methods Mol Biol. 2015; 1237(1):129-138 Doi: 10.1007/978-1-4939-1776-1_13
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Moissl-Eichinger, C; Auerbach, AK; Probst, AJ; Mahnert, A; Tom, L; Piceno, Y; Andersen, GL; Venkateswaran, K; Rettberg, P; Barczyk, S; Pukall, R; Berg, G Quo vadis? Microbial profiling revealed strong effects of cleanroom maintenance and routes of contamination in indoor environments.
Sci Rep. 2015; 5(8):9156-9156 Doi: 10.1038/srep09156 [OPEN ACCESS]
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Wiesner, T; Kiuru, M; Scott, SN; Arcila, M; Halpern, AC; Hollmann, T; Berger, MF; Busam, KJ NF1 Mutations Are Common in Desmoplastic Melanoma.
Am J Surg Pathol. 2015; 39(10): 1357-1362. Doi: 10.1097/PAS.0000000000000451 [OPEN ACCESS]
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Zopf, A; Raim, R; Danzer, M; Niklas, N; Spilka, R; Pröll, J; Gabriel, C; Nechansky, A; Roucka, M Introduction of the hybcell-based compact sequencing technology and comparison to state-of-the-art methodologies for KRAS mutation detection.
Biotechniques. 2015; 58(3):126-134 Doi: 10.2144/000114264 [OPEN ACCESS]
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2014

Heidary, M; Auer, M; Ulz, P; Heitzer, E; Petru, E; Gasch, C; Riethdorf, S; Mauermann, O; Lafer, I; Pristauz, G; Lax, S; Pantel, K; Geigl, JB; Speicher, MR The dynamic range of circulating tumor DNA in metastatic breast cancer.
Breast Cancer Res. 2014; 16(4):421-421 Doi: 10.1186/s13058-014-0421-y [OPEN ACCESS]
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Mohan, S; Heitzer, E; Ulz, P; Lafer, I; Lax, S; Auer, M; Pichler, M; Gerger, A; Eisner, F; Hoefler, G; Bauernhofer, T; Geigl, JB; Speicher, MR Changes in colorectal carcinoma genomes under anti-EGFR therapy identified by whole-genome plasma DNA sequencing.
PLoS Genet. 2014; 10(3):e1004271-e1004271 Doi: 10.1371/journal.pgen.1004271 [OPEN ACCESS]
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Stückler, C; Danzer, M; Raml, E; Steitzer, H; Gabriel, C Characterization of a novel HLA-A*33 allele, A*33:47, using next-generation sequencing.
Tissue Antigens. 2014; 84(4):414-415 Doi: 10.1111/tan.12386
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2013

Bysani, M; Wallerman, O; Bornelöv, S; Zatloukal, K; Komorowski, J; Wadelius, C ChIP-seq in steatohepatitis and normal liver tissue identifies candidate disease mechanisms related to progression to cancer.
BMC Med Genomics. 2013; 6(11):50-50 Doi: 10.1186/1755-8794-6-50 [OPEN ACCESS]
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Neumann, M; Heesch, S; Schlee, C; Schwartz, S; Gökbuget, N; Hoelzer, D; Konstandin, NP; Ksienzyk, B; Vosberg, S; Graf, A; Krebs, S; Blum, H; Raff, T; Brüggemann, M; Hofmann, WK; Hecht, J; Bohlander, SK; Greif, PA; Baldus, CD Whole-exome sequencing in adult ETP-ALL reveals a high rate of DNMT3A mutations.
Blood. 2013; 121(23): 4749-4752. Doi: 10.1182/blood-2012-11-465138
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2011

Guelly, C; Zhu, PP; Leonardis, L; Papic, L; Zidar, J; Schabhüttl, M; Strohmaier, H; Weis, J; Strom, TM; Baets, J; Willems, J; De Jonghe, P; Reilly, MM; Fröhlich, E; Hatz, M; Trajanoski, S; Pieber, TR; Janecke, AR; Blackstone, C; Auer-Grumbach, M Targeted high-throughput sequencing identifies mutations in atlastin-1 as a cause of hereditary sensory neuropathy type I.
Am J Hum Genet. 2011; 88(1):99-105 Doi: 10.1016/j.ajhg.2010.12.003 [OPEN ACCESS]
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Kohlmann, A; Klein, HU; Weissmann, S; Bresolin, S; Chaplin, T; Cuppens, H; Haschke-Becher, E; Garicochea, B; Grossmann, V; Hanczaruk, B; Hebestreit, K; Gabriel, C; Iacobucci, I; Jansen, JH; te Kronnie, G; van de Locht, L; Martinelli, G; McGowan, K; Schweiger, MR; Timmermann, B; Vandenberghe, P; Young, BD; Dugas, M; Haferlach, T The Interlaboratory RObustness of Next-generation sequencing (IRON) study: a deep sequencing investigation of TET2, CBL and KRAS mutations by an international consortium involving 10 laboratories.
Leukemia. 2011; 25(12): 1840-1848. Doi: 10.1038/leu.2011.155 [OPEN ACCESS]
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Pröll, J; Danzer, M; Stabentheiner, S; Niklas, N; Hackl, C; Hofer, K; Atzmüller, S; Hufnagl, P; Gülly, C; Hauser, H; Krieger, O; Gabriel, C Sequence capture and next generation resequencing of the MHC region highlights potential transplantation determinants in HLA identical haematopoietic stem cell transplantation.
DNA Res. 2011; 18(4):201-210 Doi: 10.1093/dnares/dsr008 [OPEN ACCESS]
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