Medizinische Universität Graz Austria/Österreich - Forschungsportal - Medical University of Graz

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Publikationen

Suchbegriffe: BACTERIA - GENETICS , . Treffer: 34

2017

Costea, PI; Zeller, G; Sunagawa, S; Pelletier, E; Alberti, A; Levenez, F; Tramontano, M; Driessen, M; Hercog, R; Jung, FE; Kultima, JR; Hayward, MR; Coelho, LP; Allen-Vercoe, E; Bertrand, L; Blaut, M; Brown, JRM; Carton, T; Cools-Portier, S; Daigneault, M; Derrien, M; Druesne, A; de Vos, WM; Finlay, BB; Flint, HJ; Guarner, F; Hattori, M; Heilig, H; Luna, RA; van Hylckama Vlieg, J; Junick, J; Klymiuk, I; Langella, P; Le Chatelier, E; Mai, V; Manichanh, C; Martin, JC; Mery, C; Morita, H; O'Toole, PW; Orvain, C; Patil, KR; Penders, J; Persson, S; Pons, N; Popova, M; Salonen, A; Saulnier, D; Scott, KP; Singh, B; Slezak, K; Veiga, P; Versalovic, J; Zhao, L; Zoetendal, EG; Ehrlich, SD; Dore, J; Bork, P Towards standards for human fecal sample processing in metagenomic studies.
Nat Biotechnol. 2017; 35(11):1069-1076 [OPEN ACCESS]
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Koskinen, K; Rettberg, P; Pukall, R; Auerbach, A; Wink, L; Barczyk, S; Perras, A; Mahnert, A; Margheritis, D; Kminek, G; Moissl-Eichinger, C Microbial biodiversity assessment of the European Space Agency's ExoMars 2016 mission.
Microbiome. 2017; 5(1):143-143 [OPEN ACCESS]
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Schwendner, P; Mahnert, A; Koskinen, K; Moissl-Eichinger, C; Barczyk, S; Wirth, R; Berg, G; Rettberg, P Preparing for the crewed Mars journey: microbiota dynamics in the confined Mars500 habitat during simulated Mars flight and landing.
Microbiome. 2017; 5(1):129-129 [OPEN ACCESS]
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2016

Chan, AA; Bashir, M; Rivas, MN; Duvall, K; Sieling, PA; Pieber, TR; Vaishampayan, PA; Love, SM; Lee, DJ Characterization of the microbiome of nipple aspirate fluid of breast cancer survivors.
Sci Rep. 2016; 6(36):28061-28061 [OPEN ACCESS]
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Loibner, M; Buzina, W; Viertler, C; Groelz, D; Hausleitner, A; Siaulyte, G; Kufferath, I; Kölli, B; Zatloukal, K Pathogen Inactivating Properties and Increased Sensitivity in Molecular Diagnostics by PAXgene, a Novel Non-Crosslinking Tissue Fixative.
PLoS One. 2016; 11(3):e0151383-e0151383 [OPEN ACCESS]
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Mora, M; Perras, A; Alekhova, TA; Wink, L; Krause, R; Aleksandrova, A; Novozhilova, T; Moissl-Eichinger, C Resilient microorganisms in dust samples of the International Space Station-survival of the adaptation specialists.
Microbiome. 2016; 4(1):65-65 [OPEN ACCESS]
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Weiß, S; Somitsch, W; Klymiuk, I; Trajanoski, S; Guebitz, GM Comparison of biogas sludge and raw crop material as source of hydrolytic cultures for anaerobic digestion.
Bioresour Technol. 2016; 207(6):244-251
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2015

Leitner, E; Kessler, HH Broad-range PCR for the identification of bacterial and fungal pathogens from blood: a sequencing approach.
Methods Mol Biol. 2015; 1237(1):129-138
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Mahnert, A; Vaishampayan, P; Probst, AJ; Auerbach, A; Moissl-Eichinger, C; Venkateswaran, K; Berg, G Cleanroom Maintenance Significantly Reduces Abundance but Not Diversity of Indoor Microbiomes.
PLoS One. 2015; 10(8):e0134848-e0134848 [OPEN ACCESS]
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Moissl-Eichinger, C; Auerbach, AK; Probst, AJ; Mahnert, A; Tom, L; Piceno, Y; Andersen, GL; Venkateswaran, K; Rettberg, P; Barczyk, S; Pukall, R; Berg, G Quo vadis? Microbial profiling revealed strong effects of cleanroom maintenance and routes of contamination in indoor environments.
Sci Rep. 2015; 5(8):9156-9156 [OPEN ACCESS]
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Ribitsch, D; Herrero Acero, E; Przylucka, A; Zitzenbacher, S; Marold, A; Gamerith, C; Tscheließnig, R; Jungbauer, A; Rennhofer, H; Lichtenegger, H; Amenitsch, H; Bonazza, K; Kubicek, CP; Druzhinina, IS; Guebitz, GM Enhanced cutinase-catalyzed hydrolysis of polyethylene terephthalate by covalent fusion to hydrophobins.
Appl Environ Microbiol. 2015; 81(11):3586-3592 [OPEN ACCESS]
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2014

Berg, G; Erlacher, A; Smalla, K; Krause, R Vegetable microbiomes: is there a connection among opportunistic infections, human health and our 'gut feeling'?
Microb Biotechnol. 2014; 7(6):487-495 [OPEN ACCESS]
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Göhler, A; Hetzer, A; Holtfreter, B; Geisel, MH; Schmidt, CO; Steinmetz, I; Kocher, T Quantitative molecular detection of putative periodontal pathogens in clinically healthy and periodontally diseased subjects.
PLoS One. 2014; 9(7):e99244-e99244 [OPEN ACCESS]
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Petternel, C; Galler, H; Zarfel, G; Luxner, J; Haas, D; Grisold, AJ; Reinthaler, FF; Feierl, G Isolation and characterization of multidrug-resistant bacteria from minced meat in Austria.
Food Microbiol. 2014; 44(8):41-46
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Probst, AJ; Birarda, G; Holman, HY; DeSantis, TZ; Wanner, G; Andersen, GL; Perras, AK; Meck, S; Völkel, J; Bechtel, HA; Wirth, R; Moissl-Eichinger, C Coupling genetic and chemical microbiome profiling reveals heterogeneity of archaeome and bacteriome in subsurface biofilms that are dominated by the same archaeal species.
PLoS One. 2014; 9(6):e99801-e99801 [OPEN ACCESS]
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Zarfel, G; Galler, H; Luxner, J; Petternel, C; Reinthaler, FF; Haas, D; Kittinger, C; Grisold, AJ; Pless, P; Feierl, G Multiresistant bacteria isolated from chicken meat in Austria.
Int J Environ Res Public Health. 2014; 11(12):12582-12593 [OPEN ACCESS]
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2013

Leitner, E; Kessler, HH; Spindelboeck, W; Hoenigl, M; Putz-Bankuti, C; Stadlbauer-Köllner, V; Krause, R; Grisold, AJ; Feierl, G; Stauber, RE Comparison of two molecular assays with conventional blood culture for diagnosis of sepsis.
J Microbiol Methods. 2013; 92(3):253-255
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Leitner, E; Scherr, S; Strempfl, C; Krause, R; Feierl, G; Grisold, AJ Rapid identification of pathogens with the hemoFISH test applying a novel beacon-based fluorescence in situ hybridization (bbFISH) technology in positive blood culture bottles.
J Mol Diagn. 2013; 15(6):835-839 [OPEN ACCESS]
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Oberauner, L; Zachow, C; Lackner, S; Högenauer, C; Smolle, KH; Berg, G The ignored diversity: complex bacterial communities in intensive care units revealed by 16S pyrosequencing.
Sci Rep. 2013; 3(5-6):1413-1413 [OPEN ACCESS]
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Probst, AJ; Holman, HY; DeSantis, TZ; Andersen, GL; Birarda, G; Bechtel, HA; Piceno, YM; Sonnleitner, M; Venkateswaran, K; Moissl-Eichinger, C Tackling the minority: sulfate-reducing bacteria in an archaea-dominated subsurface biofilm.
ISME J. 2013; 7(3):635-651 [OPEN ACCESS]
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2012

Haange, SB; Oberbach, A; Schlichting, N; Hugenholtz, F; Smidt, H; von Bergen, M; Till, H; Seifert, J Metaproteome analysis and molecular genetics of rat intestinal microbiota reveals section and localization resolved species distribution and enzymatic functionalities.
J Proteome Res. 2012; 11(11):5406-5417
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Nieminen, TT; Koskinen, K; Laine, P; Hultman, J; Säde, E; Paulin, L; Paloranta, A; Johansson, P; Björkroth, J; Auvinen, P Comparison of microbial communities in marinated and unmarinated broiler meat by metagenomics.
Int J Food Microbiol. 2012; 157(2): 142-149.
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Stieglmeier, M; Rettberg, P; Barczyk, S; Bohmeier, M; Pukall, R; Wirth, R; Moissl-Eichinger, C Abundance and diversity of microbial inhabitants in European spacecraft-associated clean rooms.
Astrobiology. 2012; 12(6):572-585
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2011

Koskinen, K; Hultman, J; Paulin, L; Auvinen, P; Kankaanpää, H Spatially differing bacterial communities in water columns of the northern Baltic Sea.
FEMS Microbiol Ecol. 2011; 75(1): 99-110. [OPEN ACCESS]
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Kwan, K; Cooper, M; La Duc, MT; Vaishampayan, P; Stam, C; Benardini, JN; Scalzi, G; Moissl-Eichinger, C; Venkateswaran, K Evaluation of procedures for the collection, processing, and analysis of biomolecules from low-biomass surfaces.
Appl Environ Microbiol. 2011; 77(9):2943-2953 [OPEN ACCESS]
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2010

Grisold, AJ; Zarfel, G; Strenger, V; Feierl, G; Leitner, E; Masoud, L; Hoenigl, M; Raggam, RB; Dosch, V; Marth, E Use of automated repetitive-sequence-based PCR for rapid laboratory confirmation of nosocomial outbreaks.
J Infect. 2010; 60(1):44-51
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2009

Rohban, R; Amoozegar, MA; Ventosa, A Screening and isolation of halophilic bacteria producing extracellular hydrolyses from Howz Soltan Lake, Iran.
J Ind Microbiol Biotechnol. 2009; 36(3):333-340
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2007

Moissl, C; Osman, S; La Duc, MT; Dekas, A; Brodie, E; DeSantis, T; Desantis, T; Venkateswaran, K Molecular bacterial community analysis of clean rooms where spacecraft are assembled.
FEMS Microbiol Ecol. 2007; 61(3):509-521 [OPEN ACCESS]
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Weissenböck, H; Mrakovcic, M; Ladinig, A; Fragner, K In situ hybridization for Lawsonia intracellularis--specific 16s rRNA sequence in paraffin-embedded tissue using a digoxigenin-labeled oligonucleotide probe.
J Vet Diagn Invest. 2007; 19(3): 282-285. [OPEN ACCESS]
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2005

Kneitz, C; Suerbaum, S; Beer, M; Muller, J; Jahns, R; Tony, HP Exacerbation of Whipple's disease associated with infliximab treatment
Scand J Rheumatol. 2005; 34(2):148-151 (- Case Report)
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Zahrl, D; Wagner, M; Bischof, K; Bayer, M; Zavecz, B; Beranek, A; Ruckenstuhl, C; Zarfel, GE; Koraimann, G Peptidoglycan degradation by specialized lytic transglycosylases associated with type III and type IV secretion systems.
Microbiology. 2005; 151(Pt 11):3455-3467 [OPEN ACCESS]
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2004

Rudolph, C; Moissl, C; Henneberger, R; Huber, R Ecology and microbial structures of archaeal/bacterial strings-of-pearls communities and archaeal relatives thriving in cold sulfidic springs.
FEMS Microbiol Ecol. 2004; 50(1):1-11
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2002

Moissl, C; Rudolph, C; Huber, R Natural communities of novel archaea and bacteria with a string-of-pearls-like morphology: molecular analysis of the bacterial partners.
Appl Environ Microbiol. 2002; 68(2):933-937 [OPEN ACCESS]
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1998

Bibel, M; Brettl, C; Gosslar, U; Kriegshäuser, G; Liebl, W Isolation and analysis of genes for amylolytic enzymes of the hyperthermophilic bacterium Thermotoga maritima.
FEMS Microbiol Lett. 1998; 158(1):9-15 [OPEN ACCESS]
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